Publications

Found 238 results
Author Title Type [ Year(Asc)]
Filters: Author is Richard M. Karp  [Clear All Filters]
2012
Kirkpatrick, B., Reshef Y., Finucane H., Jiang H., Zhu B., & Karp R. M. (2012).  Comparing Pedigree Graphs. Journal of Computational Biology. 19(9), 998-1014.
Sharan, R., & Karp R. M. (2012).  Reconstructing Boolean Models of Signaling. 261-271.
Karp, R. M. (2012).  Theory of Computation as an Enabling Tool for the Sciences.
Karp, R. M. (2012).  Theory of Computation as an Enabling Tool for the Sciences.
2011
Chandrasekaran, K.., Karp R. M., Moreno-Centeno E.., & Vempala S.. (2011).  Algorithms for Implicit Hitting Set Problems. 614-629.
Hodgkinson, L., & Karp R. M. (2011).  Algorithms to Detect Multiprotein Modularity Conserved During Evolution. IEEE/ACM Transactions on Computational Biology and Bioinformatics.
Hodgkinson, L., & Karp R. M. (2011).  Algorithms to Detect Multi-Protein Modularity Conserved During Evolution.
Hodgkinson, L., & Karp R. M. (2011).  Algorithms to Detect Multiprotein Modularity Conserved During Evolution.
Karp, R. M. (2011).  Effective Heuristics for NP-Hard Problems.
Zaharia, M., Bolosky W. J., Curtis K., Fox A., Patterson D., Shenker S. J., et al. (2011).  Faster and More Accurate Sequence Alignment with SNAP.
Karp, R. M. (2011).  Heuristic Algorithms in Computations Molecular Biology. Journal of Computer and System Sciences. 77(1), 122-128.
Kirkpatrick, B., Li S. Cheng, Karp R. M., & Halperin E. (2011).  Pedigree Reconstruction Using Identity by Descent. Journal of Computational Biology. 18(11), 1481-1493.
Kirkpatrick, B., Li S. Cheng, Karp R. M., & Halperin E. (2011).  Pedigree Reconstruction Using Identity by Descent. 136-152.
Maron-Katz, A., Ben Simon E., Jacob Y., Rosenberg K., Karp R. M., Hendler T., et al. (2011).  Using Contiguous Bi-Clustering for Data Driven Temporal Analysis of fMRI Based Functional Connectivity. Proceedings of the 4th Annual INCF Neuroinformatics Congress.
2010
Kirkpatrick, B., Finucane H., Reshef Y., & Karp R. M. (2010).  Algorithms for Comparing Pedigree Graphs.
Srivas, R., Hannum G., Guénolé A., van Attikum H., Krogan N. J., Karp R. M., et al. (2010).  Genome-Wide Association Data Reveal a Global Map of Genetic Interactions among Protein Complexes.
Kirkpatrick, B., Halperin E., & Karp R. M. (2010).  Haplotype Inference in Complex Pedigrees. Journal of Computational Biology. 17(3), 269-280.
Karp, R. M. (2010).  Implicit Hitting Set Problems and Multi-Genome Alignment.
Yosef, N.., Gramm J., Wang Q.-F.., Noble W.. S., Karp R. M., & Sharan R. (2010).  Prediction of Phenotype Information from Genotype Data. Communications in Information and Systems. 10(2), 99-114.
Bruckner, S., Hüffner F., Karp R. M., Shamir R., & Sharan R. (2010).  Topology-Free Querying of Protein Interaction Networks. Journal of Computational Biology. 17(3), 237-252.
Bruckner, S., Hüffner F., Karp R. M., Shamir R., & Sharan R. (2010).  Torque: Topology-Free Querying of Protein Interaction Networks. Journal of Computational Biology. 17(3), 237-252.
Karp, R. M. (2010).  Understanding Science Through the Lens of Computation.
2009
Hannum, G., Srivas R., Guénolé A., van Attikum H., Krogan N. J., Karp R. M., et al. (2009).  Genome-Wide Association Data Reveal a Global Map of Genetic Interaction Among Protein Complexes. PLoS Genetics. 5(12), 
Kirkpatrick, B., Rosa J.., Halperin E., & Karp R. M. (2009).  Haplotype Inference in Complex Pedigrees. 108-120.
P. Godfrey, B., & Karp R. M. (2009).  On the Price of Heterogeneity in Parallel Systems. Theory of Computing Systems. 45(2), 280-301.

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